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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs9927481 chr16:20890740 T/C 9.14E-5 490 16.37 14.7 17.65 KM Plot
THCA rs9928854 chr16:20837561 G/A 9.15E-5 490 16.37 14.67 17.65 KM Plot
THCA rs9935302 chr16:6045211 G/A 6.27E-5 467 14.47 16.87 16.15 KM Plot
THCA rs9935891 chr16:20874902 C/T 9.2E-5 489 16.37 14.75 17.65 KM Plot
THCA rs9937963 chr16:20687566 C/T 1.3E-6 477 15.9 15.25 42.77 KM Plot
THCA rs9973291 chr19:15867175 A/T 0.000309 490 16.33 14.93 19.13 KM Plot
THCA rs9992322 chr4:1067032 G/A 2.58E-5 488 15.97 15.3 9.85 KM Plot
THCA rs9992924 chr4:6711760 C/G 5.23E-6 483 16.73 13.83 13.28 KM Plot
THCA rs9992941 chr4:6711801 C/G 7.85E-6 490 13.28 14 16.73 KM Plot
THCA rs9993509 chr4:110744957 C/G 0.000137 480 16.57 15.4 14.47 KM Plot
THYM rs10178409 chr2:73855507 G/T 7.3E-5 109 37.63 46.07 32.7 KM Plot
THYM rs10179134 chr2:73637519 A/G 4.33E-5 111 38.13 43.82 11.87 KM Plot
THYM rs10183818 chr2:73714556 A/G 7.68E-5 109 38.13 46.6 32.7 KM Plot
THYM rs10187192 chr2:73713500 T/C 7.29E-5 110 37.63 46.6 32.7 KM Plot
THYM rs1021328 chr8:82736706 T/A 4.45E-5 113 42.82 35.77 22.5 KM Plot